Illumina RNA sequencing of transcriptome paired-end library 'SM-49JAD... - SRA

SRX509401: Illumina RNA sequencing of transcriptome paired-end library 'SM-49JAD' containing sample '23-Mp5_ACID_B' from individual 'Mp5_Rv2745c'
8 ILLUMINA (Illumina HiSeq 2000) runs: 9.2M spots, 1.3G bases, 639.7Mb downloads

UUID: d54e25be-e21d-489a-ac98-2defe486de88

Design: Illumina sequencing of Mycobacterium tuberculosis Mp5_Rv2745c via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC RNASeq

PRJNA236897 • SRP040861 • All experiments • All runs

Sample:

SAMN02672806 • SRS588009 • All experiments • All runs

Organism: Mycobacterium tuberculosis Mp5_Rv2745c

Library:

Name: SM-49JAD

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward69 reverse

Experiment attributes: (show all 10 attributes...) (hide...)

analysis_type: Resequencing

gssr_id: 486341.0

library_type: cDNAShotgunReadTwoSense

lsid: BROAD:SEQUENCING_SAMPLE:486341.0

material_type: New Tech Library

product_order: PDO-3137

product_part_number: P-SEQ-0003

project: G61757

research_project: RP-564

work_request: 40232

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-14 12:09:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 8 runs, 9.2M spots, 1.3G bases, 639.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1215490	1,153,746	156.9M	80.9Mb	2014-04-03
SRR1219170	1,168,155	158.9M	81.3Mb	2014-04-06
SRR1220064	1,132,906	154.1M	79.1Mb	2014-04-07
SRR1221260	1,148,504	156.2M	80.3Mb	2014-04-08
SRR1223450	1,184,110	161M	82.9Mb	2014-04-08
SRR1225427	1,143,185	155.5M	79.8Mb	2014-04-09
SRR1231678	1,124,756	153M	77.4Mb	2014-04-10
SRR1232825	1,145,467	155.8M	78Mb	2014-04-11

ID:: 708705

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Recent activity